Building ALLAS: Creation of an Asthma and Allergies App

The purpose of this project was to determine the potential need for an app to allow patients to self-manage their asthma and allergies. Through a substantial literature review, the need for an app as well as a desire for this population to manage their disease was demonstrated. Determination was made to have three separate components to create an all-inclusive app, an education component, an asthma tracker, and a personalized allergy profile. The app was storyboarded before being sent to providers and small focus group for proof of concept and functionality of components. The app, ALLAS, was constructed and housed on goodbarber.com allowing the creator to update information and push that information out immediately as features or along with the establishment of an LLC (Limited Liability Corporation) and trademarking of ALLAS. Content will continue to be added and beta-testing will occur in early 2017 in preparation of a general release to all mobile device download stores. For sustainability, ALLAS is currently funded by the creator, with the ability to have advertising on screens in the app

Altered chemomechanical coupling causes impaired motility of the kinesin-4 motors KIF27 and KIF7.

Kinesin-4 motors play important roles in cell division, microtubule organization, and signaling. Understanding how motors perform their functions requires an understanding of their mechanochemical and motility properties. We demonstrate that KIF27 can influence microtubule dynamics, suggesting a conserved function in microtubule organization across the kinesin-4 family. However, kinesin-4 motors display dramatically different motility characteristics: KIF4 and KIF21 motors are fast and processive, KIF7 and its Drosophila melanogaster homologue Costal2 (Cos2) are immotile, and KIF27 is slow and processive. Neither KIF7 nor KIF27 can cooperate for fast processive transport when working in teams. The mechanistic basis of immotile KIF7 behavior arises from an inability to release adenosine diphosphate in response to microtubule binding, whereas slow processive KIF27 behavior arises from a slow adenosine triphosphatase rate and a high affinity for both adenosine triphosphate and microtubules. We suggest that evolutionarily selected sequence differences enable immotile KIF7 and Cos2 motors to function not as transporters but as microtubule-based tethers of signaling complexes

Ultrasound capsule endoscopy:sounding out the future

Video capsule endoscopy (VCE) has been of immense benefit in the diagnosis and management of gastrointestinal (GI) disorders since its introduction in 2001. However, it suffers from a number of well recognized deficiencies. Amongst these is the limited capability of white light imaging, which is restricted to analysis of the mucosal surface. Current capsule endoscopes are dependent on visual manifestation of disease and limited in regards to transmural imaging and detection of deeper pathology. Ultrasound capsule endoscopy (USCE) has the potential to overcome surface only imaging and provide transmural scans of the GI tract. The integration of high frequency microultrasound (µUS) into capsule endoscopy would allow high resolution transmural images and provide a means of both qualitative and quantitative assessment of the bowel wall. Quantitative ultrasound (QUS) can provide data in an objective and measurable manner, potentially reducing lengthy interpretation times by incorporation into an automated diagnostic process. The research described here is focused on the development of USCE and other complementary diagnostic and therapeutic modalities. Presently investigations have entered a preclinical phase with laboratory investigations running concurrently

Evaluation of Sample Design and Estimation Methods for Great Lakes Angler Surveys

The waters of the Great Lakes support outstanding recreational fishing opportunities. Total catch and effort estimates obtained from on‐site angler surveys are essential for the management of the recreational fisheries. However, quality of angler survey estimates can be greatly affected by the survey design and estimation approaches used. Using Monte Carlo simulation techniques, we evaluated the effects of two potential sources of bias (disproportional sampling of angler trips and subsampling of the fishing day) on two catch estimators: (1) a multiple‐day estimator that ignores day effects and pools the angler trip data over a multiple‐day period, and (2) a daily estimator that treats the trip data in each day separately. When catch rates are constant among different time periods of the fishing day, the daily estimator produces total catch estimates with little bias, whereas the multiple‐day estimator is prone to bias caused by disproportional sampling of angler trips. When catch rates vary among different periods of a fishing day, the daily estimator produces biased estimates of total catch when the fishing day is subsampled, whereas the multiple‐day estimator is less affected by the variation in daily time‐period catch rates and subsampling of fishing days. Quality of total catch and effort estimates, in terms of root mean square error and coverage probability of confidence intervals, is poor when the number of days sampled each month is low and fishing days are subsampled.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/141929/1/tafs0234.pd

Radial Velocity Discovery of an Eccentric Jovian World Orbiting at 18 au

Based on two decades of radial velocity (RV) observations using Keck/High Resolution Echelle Spectrometer (HIRES) and McDonald/Tull, and more recent observations using the Automated Planet Finder, we found that the nearby star HR 5183 (HD 120066) hosts a 3 minimum mass planet with an orbital period of yr. The orbit is highly eccentric (e ≃ 0.84), shuttling the planet from within the orbit of Jupiter to beyond the orbit of Neptune. Our careful survey design enabled high cadence observations before, during, and after the planet\u27s periastron passage, yielding precise orbital parameter constraints. We searched for stellar or planetary companions that could have excited the planet\u27s eccentricity, but found no candidates, potentially implying that the perturber was ejected from the system. We did identify a bound stellar companion more than 15,000 au from the primary, but reasoned that it is currently too widely separated to have an appreciable effect on HR 5183 b. Because HR 5183 b\u27s wide orbit takes it more than 30 au (1\u27\u27) from its star, we also explored the potential of complimentary studies with direct imaging or stellar astrometry. We found that a Gaia detection is very likely, and that imaging at 10 μm is a promising avenue. This discovery highlights the value of long-baseline RV surveys for discovering and characterizing long-period, eccentric Jovian planets. This population may offer important insights into the dynamical evolution of planetary systems containing multiple massive planets

Epidermal growth factor receptor downregulation by small heterodimeric binding proteins

No single engineered protein has been shown previously to robustly downregulate epidermal growth factor receptor (EGFR), a validated cancer target. A panel of fibronectin-based domains was engineered to bind with picomolar to nanomolar affinity to multiple epitopes of EGFR. Monovalent and homo- and hetero-bivalent dimers of these domains were tested for EGFR downregulation. Selected orientations of non-competitive heterodimers decrease EGFR levels by up to 80% in multiple cell types, without activating receptor signaling. These heterodimers inhibit autophosphorylation, proliferation and migration, and are synergistic with the monoclonal antibody cetuximab in these activities. These small (25 kDa) heterodimers represent a novel modality for modulating surface receptor levels.National Institutes of Health (U.S.) (NIH grant CA96504)National Institutes of Health (U.S.) (NIH grant CA118705)National Science Foundation (U.S.) (Graduate Research Fellowship Program

The Australian dingo is an early offshoot of modern breed dogs

Dogs are uniquely associated with human dispersal and bring transformational insight into the domestication process. Dingoes represent an intriguing case within canine evolution being geographically isolated for thousands of years. Here, we present a high-quality de novo assembly of a pure dingo (CanFam_DDS). We identified large chromosomal differences relative to the current dog reference (CanFam3.1) and confirmed no expanded pancreatic amylase gene as found in breed dogs. Phylogenetic analyses using variant pairwise matrices show that the dingo is distinct from five breed dogs with 100% bootstrap support when using Greenland wolf as the outgroup. Functionally, we observe differences in methylation patterns between the dingo and German shepherd dog genomes and differences in serum biochemistry and microbiome makeup. Our results suggest that distinct demographic and environmental conditions have shaped the dingo genome. In contrast, artificial human selection has likely shaped the genomes of domestic breed dogs after divergence from the dingo

K2-114b and K2-115b : two transiting warm Jupiters

A.C.C. acknowledges support from STFC consolidated grant number ST/M001296/1.We report the first results from a search for transiting warm Jupiter exoplanets—gas giant planets receiving stellar irradiation below about 108 erg−1 cm−2, equivalent to orbital periods beyond about 10 days around Sun-like stars. We have discovered two transiting warm Jupiter exoplanets initially identified as transiting candidates in K2 photometry. K2-114b has a mass of 1.85^(+0.23)_(-0.22) MJ, a radius of 0.942^(+0.032)_(-0.020) RJ, and an orbital period of 11.4 days. K2-115b has a mass of 0.84^(+0.18)_(-0.20) MJ, a radius of 1.115^(+0.057)_(-0.061) RJ, and an orbital period of 20.3 days. Both planets are among the longest-period transiting gas giant planets with a measured mass, and they are orbiting relatively old host stars. Both planets are not inflated, as their radii are consistent with theoretical expectations. Their position in the planet radius–stellar irradiation diagram is consistent with the scenario where the radius–irradiation correlation levels off below about 108 erg s−1 cm−2, suggesting that for warm Jupiters stellar irradiation does not play a significant role in determining the planet radius. We also report our identification of another K2 transiting warm Jupiter candidate, EPIC 212504617, as a false positive.Publisher PDFPeer reviewe